Welcome to evoten’s documentation!

evoten

Find the documentation here.

Vectorized computation of tree likelihoods.

Features

• Supports multiple models

• Highly parallel, processes trees in layers, models and input examples are treated in parallel

• Multiple compute backends (TensorFlow, pytorch)

Installation

For users:

git clone https://github.com/felbecker/evoten
cd evoten
pip install -e .[tensorflow]  # or [torch] for pytorch backend

For developers:

pip install -e .[tensorflow,torch,docs]

Minimal example

See here.

User Guide:

• Getting Started

API Reference:

• API Reference
  • Core Module
  • Model
  • Tree Handler
  • Substitution Models
  • Utilities
  • Backend: PyTorch
  • Backend: TensorFlow